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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839459.1_cds_XP_016507298.1_20437
CDS Infomation

[gene=LOC107824989] [db_xref=GeneID:107824989] [protein=2-oxoglutarate-dependent dioxygenase AOP2-like isoform X2] [protein_id=XP_016507298.1] [location=complement(join(4995..5258,5359..5446,5532..5672,6288..6661))] [gbkey=CDS]
Sequence

ATGTCTCAAACACTTTGTAAGGCTCCTATTATTGATCTCAACAAATTAGAGAAATCAAAG
CGAGGTTCAAATTCTTGGCTAGAATTGTGCAATGGCGTTCGCCTTGCACTTGAAGATCAT
GGTTATTTTATAGCACTATATGATAAGGTTTCTTCTGAAGTTGAGAAGGAAATATTTGAT
GTAATGGATGAGTTGTTTGATCTGCCCATTGAAACAAAGAAGAAGAACTCTTCTGACTTT
TATTTCTATCGATGGGTTGGTCAGCTGGAGGCAGCTCCTCTTCATGAAAGCTTTGGGATT
GTATATCCAACTCATATTCAAGCACTACAAAGCTTTACCACACTCATGTGGCCACAAGGC
AACCAAAGATTTAGTGAAACAGTAACATCGTACGTAAAGGTAGCAGCAGAACTAGAACAG
TTGGTGGACAAAATGGTGTTCGAAAGCTATGGAGTAGCAGAAAGGCACTATGAATCTCAT
ATAGCAGCCACTACATATCTCCTCCGTCCTACAAAAATCAGATTAATGGTTTGCAAGTTG
AAAGTAAAAGTGGTGATTGGATTGCTGTTAATGTCCCTCCTTCTGCATTCGTCTTCATGG
CTGGCATGGAGCAATGGAAGAATATATGCACCGCGGCACCAAGTGTTGCTGAAAGAGGAA
AAGCAAAGGTACACATTGGCCCTGTTCACATTCAACAAAGGAATAACAGATATACCTGAG
GAATTAGTGGATGAAACACATCCTTTACAATACAAGCCTTTCGATAATTTTGGATTAGCT
TGGTACTACCTCTCTGGTGCTAACTCCATGATTCACAGCACTGCTAAAGCTTACTGCGGC
ATCAATACTACTGCATCCATCGCTTGA

Peptide Sequence

PEP ID

XP_016507298.1
PEP Infomation

PREDICTED: 2-oxoglutarate-dependent dioxygenase AOP2-like isoform X2 [Nicotiana tabacum]
Sequence

MSQTLCKAPIIDLNKLEKSKRGSNSWLELCNGVRLALEDHGYFIALYDKVSSEVEKEIFD
VMDELFDLPIETKKKNSSDFYFYRWVGQLEAAPLHESFGIVYPTHIQALQSFTTLMWPQG
NQRFSETVTSYVKVAAELEQLVDKMVFESYGVAERHYESHIAATTYLLRPTKIRLMVCKL
KVKVVIGLLLMSLLLHSSSWLAWSNGRIYAPRHQVLLKEEKQRYTLALFTFNKGITDIPE
ELVDETHPLQYKPFDNFGLAWYYLSGANSMIHSTAKAYCGINTTASIA

Transcript Sequence

Gene sequence data has not been registered.